STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_21050LIM zinc-binding domain-containing protein. (199 aa)    
Predicted Functional Partners:
A6R68_01945
LID domain-containing protein.
    
 0.838
A6R68_10444
MADS-box domain-containing protein.
    
 0.832
A6R68_01501
LID domain-containing protein.
    
 0.818
A6R68_04724
Paired domain-containing protein.
  
 
 
 0.723
A6R68_07482
Uncharacterized protein.
    
  0.708
A6R68_01025
Homeobox protein engrailed-like.
    
 0.692
A6R68_21052
LIM zinc-binding domain-containing protein.
 
      0.678
A6R68_22755
Homeobox protein engrailed-like.
    
 0.670
A6R68_06721
Homeobox domain-containing protein.
   
 0.665
A6R68_14496
Uncharacterized protein.
   
0.665
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.