STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_21140TPT domain-containing protein. (365 aa)    
Predicted Functional Partners:
A6R68_10914
Uncharacterized protein.
   
  
 0.665
A6R68_01476
Uncharacterized protein.
   
  
 0.607
A6R68_15344
EamA domain-containing protein.
   
  
 0.587
A6R68_20430
TPT domain-containing protein.
   
  
 0.587
A6R68_10440
Uncharacterized protein.
   
  
 0.586
A6R68_03748
Uncharacterized protein.
   
  
 0.583
A6R68_13604
Uncharacterized protein.
      
 0.581
A6R68_16295
Uncharacterized protein; Belongs to the glycosyltransferase 23 family.
      
 0.579
A6R68_11255
Uncharacterized protein.
      
 0.549
A6R68_00517
Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter.
   
  
 0.544
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.