STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_21193Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (371 aa)    
Predicted Functional Partners:
A6R68_08448
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
  
 0.990
A6R68_14851
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.989
A6R68_17630
Ubiquitin-like domain-containing protein.
   
  0.989
A6R68_20284
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.989
A6R68_02258
Ribosomal_L14e domain-containing protein.
  
 0.988
A6R68_14376
Uncharacterized protein.
   
 0.986
A6R68_03742
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.981
A6R68_18669
Uncharacterized protein.
  
 0.981
A6R68_21231
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.981
A6R68_22987
Uncharacterized protein.
  
 
 0.981
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.