STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_22542Uncharacterized protein. (655 aa)    
Predicted Functional Partners:
A6R68_07092
Uncharacterized protein.
   
 0.900
A6R68_20366
Uncharacterized protein.
 
     
0.862
A6R68_21567
Uncharacterized protein.
   
 0.860
A6R68_08005
Uncharacterized protein.
   
 0.849
A6R68_14656
WD_REPEATS_REGION domain-containing protein.
   
 0.843
A6R68_05310
MHC_II_alpha domain-containing protein.
   
  0.836
A6R68_18065
Uncharacterized protein.
    
 0.835
A6R68_11518
Ig-like domain-containing protein; Belongs to the MHC class II family.
   
 0.829
A6R68_23514
Uncharacterized protein.
   
 0.826
A6R68_09377
Ipi1_N domain-containing protein.
   
 0.825
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.