STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A6R68_22723Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
A6R68_02811
Uncharacterized protein.
   
 0.919
A6R68_00654
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.877
A6R68_21493
Uncharacterized protein.
   
 0.876
A6R68_19317
Uncharacterized protein.
   
 0.874
A6R68_23397
Uncharacterized protein.
   
 0.873
A6R68_07312
RRM Nup35-type domain-containing protein.
    
 0.872
A6R68_14816
Peptidase S59 domain-containing protein.
   
 0.872
A6R68_08699
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.868
A6R68_01111
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
 0.867
A6R68_02196
Nup214_FG domain-containing protein.
   
 0.866
Your Current Organism:
Neotoma lepida
NCBI taxonomy Id: 56216
Other names: N. lepida, desert woodrat
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.