STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rad54bDNA repair and recombination protein RAD54B. (1029 aa)    
Predicted Functional Partners:
rhp51
DNA repair protein rhp51; Belongs to the RecA family.
   
 
 0.956
A0H81_01022
Uncharacterized protein.
   
 
 0.936
pcrA
ATP-dependent DNA helicase PcrA.
   
 
 0.914
RAD51D
DNA repair protein RAD51 4.
   
 
 0.913
mph1
ATP-dependent DNA helicase mph1.
   
 0.910
dmc1
Meiotic recombination protein dmc1; Belongs to the RNase T2 family.
   
 
 0.902
Ercc6l2
DNA excision repair protein ERCC-6-like 2.
  
0.874
arp5
Actin-like protein arp5; Belongs to the actin family.
    
 0.841
rpb6
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.838
RHM52
DNA repair and recombination protein rhm52.
    
 
 0.823
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.