STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYC3Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (266 aa)    
Predicted Functional Partners:
COX10
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
   
 
 0.880
UBC6
Ubiquitin-conjugating enzyme E2 6.
 
      0.853
A0H81_04465
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
0.808
etp1
Electron transfer protein 1, mitochondrial.
 
 
 
 0.795
fech
Ferrochelatase, mitochondrial.
     
 0.787
A0H81_12610
Uncharacterized protein.
   
 
 0.756
yipf5
Protein YIPF5.
 
    
 0.646
cyt1
Cytochrome c1, heme protein, mitochondrial.
   
 
 0.629
A0H81_05353
Uncharacterized protein y4oV.
 
      0.513
ARG1
Argininosuccinate synthase.
 
      0.508
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.