STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS15Putative serine/threonine-protein kinase VPS15. (1665 aa)    
Predicted Functional Partners:
BECN1
Beclin-1.
    
 0.999
pik3c3
Phosphatidylinositol 3-kinase VPS34.
   
 0.999
ATG1
Serine/threonine-protein kinase ATG1.
    
 0.992
A0H81_00303
Uncharacterized protein.
    
 0.975
A0H81_00302
Uncharacterized protein.
    
 0.975
lea1
U2 small nuclear ribonucleoprotein A.
 
  
  0.923
mug66
Meiotically up-regulated gene 66 protein.
     
 0.883
ATG18
Autophagy-related protein 18.
     
 0.830
ATG9
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.829
ATG5
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
     
 0.829
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.