STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcpB_0Pentachlorophenol 4-monooxygenase. (558 aa)    
Predicted Functional Partners:
TRP-1_0
Tryptophan synthase.
     
 0.762
TRP-1_1
Tryptophan synthase; Belongs to the TrpA family.
     
 0.762
A0H81_13973
Putative CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c.
     
 0.714
A0H81_06282
Putative CDP-alcohol phosphatidyltransferase class-I family protein C22A12.08c; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.714
A0H81_13149
Uncharacterized protein.
   
 0.623
coq3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial.
   
 0.623
A0H81_04916
Uncharacterized protein.
   
 0.623
NUDT12
Peroxisomal NADH pyrophosphatase NUDT12.
    
  0.618
ERG7
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.594
cyb5r4
Cytochrome b5 reductase 4; Belongs to the cytochrome b5 family.
   
 0.577
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.