STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfb4RNA polymerase II transcription factor B subunit 4. (234 aa)    
Predicted Functional Partners:
tfh47
TFIIH basal transcription factor complex p47 subunit.
   
 0.990
TFB2
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.990
tfb1
RNA polymerase II transcription factor B subunit 1.
    
 0.989
crk1
Serine/threonine-protein kinase crk1.
    
 0.985
ercc3
Putative DNA repair helicase ercc3.
    
 0.980
rad15
DNA repair helicase rad15.
    
 0.980
mcs2
Cyclin mcs2.
   
 0.980
tfa1
Transcription initiation factor IIE subunit alpha.
   
 0.974
sua7
Transcription initiation factor IIB.
    
 0.970
tbpA
TATA-box-binding protein.
   
 0.970
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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