STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MET1BDNA (Cytosine-5)-methyltransferase 1B; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (967 aa)    
Predicted Functional Partners:
Uhrf1
E3 ubiquitin-protein ligase UHRF1.
  
 0.976
UHRF1
E3 ubiquitin-protein ligase UHRF1.
  
 0.975
ubp21
Ubiquitin carboxyl-terminal hydrolase 21; Belongs to the peptidase C19 family.
   
 
 0.941
EZH1_0
Histone-lysine N-methyltransferase EZH1.
   
 0.930
EZH1_1
Histone-lysine N-methyltransferase EZH1.
   
 0.930
pcn1_0
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.918
pcn1_1
Proliferating cell nuclear antigen.
   
   0.918
A0H81_09997
Uncharacterized protein.
    
 
 0.911
HHT2_1
Histone H3; Belongs to the histone H3 family.
    
 0.884
HHT2_2
Histone H3; Belongs to the histone H3 family.
    
 0.884
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.