STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH-1_1Cellobiose dehydrogenase. (279 aa)    
Predicted Functional Partners:
PLA2G4A
Lysophospholipase.
    
  0.648
APC10
Anaphase-promoting complex subunit 10.
    
 0.629
A0H81_13860
Fungal_trans domain-containing protein.
    
  0.548
A0H81_12625
Uncharacterized protein.
    
  0.548
nit-4_1
Nitrogen assimilation transcription factor nit-4.
    
  0.548
A0H81_11856
Uncharacterized protein.
    
  0.548
A0H81_09793
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.548
A0H81_07493
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.548
A0H81_07495
Putative transcriptional regulatory protein C1F7.11c.
    
  0.548
A0H81_04443
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.548
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.