STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
skp1Suppressor of kinetochore protein 1; Belongs to the SKP1 family. (161 aa)    
Predicted Functional Partners:
Rbx1
E3 ubiquitin-protein ligase RBX1.
   
 0.973
CDC4
Cell division control protein 4.
    
 0.968
sconB
Putative E3 ubiquitin ligase complex SCF subunit sconB.
    
 0.967
pof7
F-box protein pof7.
    
 0.967
grrA_1
SCF E3 ubiquitin ligase complex F-box protein grrA.
   
 0.967
suc1
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.959
FBXW7_0
F-box/WD repeat-containing protein 7.
    
 0.958
grrA_2
SCF E3 ubiquitin ligase complex F-box protein grrA.
   
 0.957
pof11_1
F-box/WD repeat-containing protein pof11.
    
 0.956
pof11_0
F-box/WD repeat-containing protein pof11.
    
 0.956
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.