STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0H81_10968Uncharacterized protein. (505 aa)    
Predicted Functional Partners:
ebp2
Putative rRNA-processing protein ebp2.
   
 
 0.979
A0H81_07703
RRM domain-containing protein.
   
 
 0.978
SPAC4F8.04
Brix domain-containing protein C4F8.04.
   
 
 0.976
nip7
60S ribosome subunit biogenesis protein nip7.
   
 
 0.976
A0H81_08512
Putative ribosome biogenesis protein C8F11.04.
   
 
 0.975
RRP1B
Ribosomal RNA processing protein 1 B.
   
 
 0.975
nog1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.974
A0H81_05343
Uncharacterized protein.
   
 
 0.973
YTM1
Ribosome biogenesis protein YTM1.
   
 
 0.972
noc3l
Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.
   
 
 0.971
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.