STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0H81_09608Uncharacterized protein. (82 aa)    
Predicted Functional Partners:
rpa43
DNA-directed RNA polymerase I subunit rpa43.
   
 0.977
RPA12
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.973
rpa2
Putative DNA-directed RNA polymerase I subunit RPA2; Belongs to the RNA polymerase beta chain family.
   
 0.969
RPA49
DNA-directed RNA polymerase I subunit RPA49.
   
 0.968
rpc40
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.965
A0H81_09101
BTB domain-containing protein.
   
 0.960
rpb5
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
 0.958
rpb6
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.958
rpc10
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.956
rpb10
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.952
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
Server load: low (14%) [HD]