STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnpo1Transportin-1. (896 aa)    
Predicted Functional Partners:
zfs1
Zinc finger protein zfs1.
     
 0.987
GSP1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.975
A0H81_10439
Uncharacterized protein.
    
 
 0.943
A0H81_05364
RRM domain-containing protein.
    
 
 0.923
kap123
Putative importin subunit beta-4.
   
 
 0.892
sal3
Importin subunit beta-3.
   
 
 0.882
NUP98
Nuclear pore complex protein Nup98-Nup96.
    
 0.809
A0H81_09786
Peptidase S59 domain-containing protein.
    
 0.809
A0H81_09856
Uncharacterized protein.
    
 0.809
uch2
Ubiquitin carboxyl-terminal hydrolase.
    
   0.800
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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