STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddo-1D-aspartate oxidase. (517 aa)    
Predicted Functional Partners:
A0H81_06486
DAO domain-containing protein.
  
 0.882
gcv1
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.854
AGX1
Alanine--glyoxylate aminotransferase 1.
  
 
 0.848
SHM3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.822
ACU-7
Isocitrate lyase.
  
 
 0.806
mclA
Isocitrate lyase.
  
 
 0.806
gcv2
Putative glycine dehydrogenase (Decarboxylating), mitochondrial.
   
 
 0.801
A0H81_11885
Uncharacterized protein.
    
 0.799
gly1
Putative low-specificity L-threonine aldolase.
    
 0.786
AIFM2
Apoptosis-inducing factor 2.
   
 0.783
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.