STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0H81_09966DUF2405 domain-containing protein. (630 aa)    
Predicted Functional Partners:
A0H81_09961
Uncharacterized protein.
 
     0.927
A0H81_09960
Fmp27_WPPW domain-containing protein.
 
     0.924
A0H81_09965
Uncharacterized protein.
 
      0.892
DPB2
DNA polymerase epsilon subunit B.
 
      0.745
A0H81_08133
Eukaryotic translation initiation factor 5B.
   
 0.619
RSM24
37S ribosomal protein S24, mitochondrial.
    
 0.589
DAP3
28S ribosomal protein S29, mitochondrial.
    
 0.564
mrp-9
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
    
 0.559
RSM10
Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...]
   
  0.559
mrps5
Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
  0.558
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.