STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nupl2Nucleoporin-like protein 2. (628 aa)    
Predicted Functional Partners:
Tpr
Nucleoprotein TPR.
    
 0.959
gle1
Nucleoporin gle1.
   
 0.947
mug87
Nuclear pore protein.
     
 0.932
seh1
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
    
 0.876
mex67
mRNA export factor mex67.
    
 0.814
A0H81_07501
Uncharacterized protein.
    
0.806
xpo1
Exportin-1.
     
 0.787
nup44
Nucleoporin nup44.
  
  
 0.753
A0H81_06689
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.742
A0H81_13554
RRM Nup35-type domain-containing protein.
    
 0.729
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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