STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snai2Zinc finger protein SNAI2. (416 aa)    
Predicted Functional Partners:
rps14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
    
  0.700
mrps5
Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
    
  0.693
MRP4
37S ribosomal protein MRP4, mitochondrial.
   
  0.691
A0H81_12910
Uncharacterized protein.
    
  0.690
mrp-9
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
    
  0.690
mit1
Chromatin remodeling factor mit1.
    
 0.690
rpsP
30S ribosomal protein S16.
   
  0.690
rpsO
30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
  0.689
MRP2
37S ribosomal protein MRP2, mitochondrial.
    
  0.689
Polr3c
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.687
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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