STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRM10tRNA (Guanine(9)-N1)-methyltransferase. (399 aa)    
Predicted Functional Partners:
TRM8
tRNA (guanine(46)-N(7))-methyltransferase.
   
 
 0.869
RSC30
Chromatin structure-remodeling complex protein RSC30.
   
 0.841
A0H81_11019
Putative transporter C11D3.06.
   
 0.841
A0H81_02055
Putative transporter C11D3.06.
   
 0.841
A0H81_02054
Uncharacterized protein.
   
 0.841
A0H81_02005
Uncharacterized protein.
   
 0.841
A0H81_02007
Uncharacterized protein.
   
 0.841
A0H81_02001
Uncharacterized protein.
   
 0.841
TRM82
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.783
rpsO
30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
   0.743
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.