STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAR1Small COPII coat GTPase SAR1; Belongs to the small GTPase superfamily. SAR1 family. (189 aa)    
Predicted Functional Partners:
SEC12
Guanine nucleotide-exchange factor SEC12.
   
 0.999
SEC23
Protein transport protein SEC23.
    
 0.994
SEC31
Protein transport protein SEC31.
   
 0.990
SEC24
Protein transport protein SEC24.
   
 0.989
IPP1
Inorganic pyrophosphatase.
 
 
  0.939
A0H81_04209
Sec16_C domain-containing protein.
    
 0.938
A0H81_04206
Uncharacterized protein.
    
 0.938
SEC13
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
   
 0.935
A0H81_10038
Patatin-like phospholipase domain-containing protein; Lipid hydrolase; Belongs to the PLPL family.
 
      0.899
SEC22
Protein transport protein SEC22; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
   
 0.873
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.