STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neg-1Endo-1,6-beta-D-glucanase; Belongs to the glycosyl hydrolase 30 family. (537 aa)    
Predicted Functional Partners:
A0H81_11362
BUD22 family protein C4F10.06.
   
 
 0.873
lacA_1
Beta-galactosidase.
  
 0.855
lacA_0
Putative beta-galactosidase A.
  
 0.855
asm-2
Sphingomyelin phosphodiesterase 2.
   
 
 0.828
PPN1
Endopolyphosphatase.
   
 
 0.800
ACER3
Alkaline ceramidase 3.
     
 0.779
A0H81_14125
Neutral ceramidase.
     
 0.774
A0H81_02684
BZIP domain-containing protein.
     
 0.772
lcb4
Sphingoid long chain base kinase 4.
    
 0.769
SPHK1
Sphingosine kinase 1.
    
 0.765
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.