STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHS3Chitin synthase; Plays a major role in cell wall biogenesis. (858 aa)    
Predicted Functional Partners:
Uap1
UDP-N-acetylhexosamine pyrophosphorylase.
   
 
 0.809
UBC12
NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.
 
      0.722
UGD1
UDP-glucose 6-dehydrogenase.
  
 
 0.678
Sgtb
Small glutamine-rich tetratricopeptide repeat-containing protein beta.
   
 0.642
ucp7
UBA domain-containing protein 7.
   
 0.632
A0H81_13851
Uncharacterized protein.
   
 0.609
abfC
Putative alpha-L-arabinofuranosidase C.
   
 0.609
tpr1
Tetratricopeptide repeat protein 1.
   
 0.609
A0H81_08424
Uncharacterized protein.
   
 0.609
RPAP3
RNA polymerase II-associated protein 3.
   
 0.609
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.