STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aats-cysCysteine--tRNA ligase, cytoplasmic. (137 aa)    
Predicted Functional Partners:
EEF1G
Elongation factor 1-gamma.
   
 0.955
A0H81_09335
Putative cysteine--tRNA ligase.
 
     0.946
SHM3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.854
gpi12
Putative N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.
  
 
 0.853
TRP-1_0
Tryptophan synthase.
  
 
 0.850
TRP-1_1
Tryptophan synthase; Belongs to the TrpA family.
  
 
 0.850
TPI
Triosephosphate isomerase.
 
 
  
 0.813
yars
Tyrosine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.804
MET14
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
    
 0.782
SPBC776.03
Putative homoserine dehydrogenase.
    
  0.756
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.