STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppi1_1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (181 aa)    
Predicted Functional Partners:
A0H81_09931
Uncharacterized protein.
    
  0.961
A0H81_08445
WD_REPEATS_REGION domain-containing protein.
 
 
 0.958
RANBP1
Ran-specific GTPase-activating protein.
 
 
 0.925
NSP1
Nucleoporin NSP1.
   
 0.903
GSP1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.872
PRPF19
Pre-mRNA-processing factor 19.
    
 0.855
PRP45
Pre-mRNA-processing protein 45.
    
 0.852
SYF1
Pre-mRNA-splicing factor SYF1.
    
 0.852
Tbl1xr1
F-box-like/WD repeat-containing protein TBL1XR1.
   
 0.844
A0H81_06689
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.829
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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