STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rad13_1DNA repair protein rad13. (575 aa)    
Predicted Functional Partners:
tfb1
RNA polymerase II transcription factor B subunit 1.
    
 0.974
ercc3
Putative DNA repair helicase ercc3.
    
 0.973
rad15
DNA repair helicase rad15.
    
 0.970
tfh47
TFIIH basal transcription factor complex p47 subunit.
    
 0.953
Wrn
Werner syndrome ATP-dependent helicase.
   
 0.921
A0H81_03601
3'-5' exonuclease domain-containing protein.
   
 0.921
wrn_1
Werner syndrome ATP-dependent helicase.
   
 0.921
rad13_0
DNA repair protein rad13.
 
     0.917
mph1
ATP-dependent DNA helicase mph1.
   
 0.911
pcn1_0
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.899
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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