STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYMPKSymplekin. (990 aa)    
Predicted Functional Partners:
pfs2
Polyadenylation factor subunit 2.
    
 0.999
YTH1
mRNA 3'-end-processing protein YTH1.
    
 0.999
RNA14
mRNA 3'-end-processing protein RNA14.
    
 0.995
pla1
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.992
SSU72
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 
 0.992
A0H81_09953
Uncharacterized protein C4G9.04c.
    
 0.990
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.989
NSP1
Nucleoporin NSP1.
   
 
  0.987
Wdr82
WD repeat-containing protein 82.
   
 
 0.986
YSH1
Endoribonuclease YSH1.
   
 0.981
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.