STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0H81_06478Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
taf5
Transcription initiation factor TFIID subunit 5.
   
 0.937
sgf73
SAGA-associated factor 73.
    
 0.932
TAF12
Transcription initiation factor TFIID subunit 12.
    
 0.931
ngg1
Chromatin-remodeling complexes subunit ngg1.
    
 0.931
Taf10
Transcription initiation factor TFIID subunit 10.
    
 0.929
TRA1_5
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
 0.927
spt3
SAGA complex subunit spt3.
    
 0.924
taf6
Transcription initiation factor TFIID subunit 6.
    
 0.922
sgf29
SAGA-associated factor 29.
    
 0.903
ADA2
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.895
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.