STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exosc6Exosome complex component MTR3. (261 aa)    
Predicted Functional Partners:
rrp41
Exosome complex component Rrp41.
   
 0.999
EXOSC4
Exosome complex component RRP41.
  
0.999
rrp45
Exosome complex component rrp45.
   
 0.999
Exosc2
Exosome complex component RRP4.
   
 0.999
csl4
Exosome complex component csl4.
   
 0.999
rrp40
Exosome complex component rrp40.
  
 0.998
EXOSC7
Exosome complex component RRP42.
  
 0.996
dis3
Exosome complex exonuclease dis3; Belongs to the RNR ribonuclease family.
   
 0.987
mtr4
ATP-dependent RNA helicase mtr4.
   
 0.982
c1d
Nuclear nucleic acid-binding protein C1D.
   
 0.978
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.