STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eri-13'-5' exonuclease eri-1. (316 aa)    
Predicted Functional Partners:
RpL38
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
     
 0.685
RPL19B
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
  0.679
rpl30a
60S ribosomal protein L30-1.
     
 0.677
rrp41
Exosome complex component Rrp41.
    
 0.660
rpl4a
60S ribosomal protein L4-A.
    
 0.659
RpL8
60S ribosomal protein L8.
   
 
  0.655
TEX10
Testis-expressed sequence 10 protein.
   
 
  0.655
RPL10
60S ribosomal protein L10.
     
 0.637
rml2
54S ribosomal protein rml2, mitochondrial.
   
 
  0.636
A0H81_04027
MRC1 domain-containing protein.
     
 0.604
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.