STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hulA_1E3 ubiquitin-protein ligase. (748 aa)    
Predicted Functional Partners:
A0H81_09997
Uncharacterized protein.
    
 0.943
RPN10
26S proteasome non-ATPase regulatory subunit 4.
    
 0.884
UBIQ
Ubiquitin.
    
 0.837
Pabp2
Polyadenylate-binding protein 2.
 
  
   0.831
ptr1
E3 ubiquitin-protein ligase ptr1.
 
  
  0.808
A0H81_13642
Uncharacterized protein.
    
 
 0.778
UBC1_1
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.778
Birc6
Baculoviral IAP repeat-containing protein 6.
    
 0.778
BIRC6
Baculoviral IAP repeat-containing protein 6.
    
 0.778
A0H81_09999
Uncharacterized protein.
    
 0.768
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.