STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSP1Nucleoporin NSP1. (1172 aa)    
Predicted Functional Partners:
nup45
Nucleoporin nup45.
   
 0.999
A0H81_13795
PARP catalytic domain-containing protein.
   
 0.999
A0H81_13554
RRM Nup35-type domain-containing protein.
    
 0.999
A0H81_13508
Uncharacterized protein.
   
 0.999
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
A0H81_13106
Uncharacterized protein.
   
 0.999
A0H81_12729
Peptidase S59 domain-containing protein.
   
 0.999
NUP98
Nuclear pore complex protein Nup98-Nup96.
   
 0.999
A0H81_13051
Uncharacterized protein.
   
 0.999
A0H81_12072
Uncharacterized protein.
   
 0.999
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.