STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpc2DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1066 aa)    
Predicted Functional Partners:
rpc40
DNA-directed RNA polymerases I and III subunit RPAC1.
  
 0.999
Polr3k
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.999
rpb5
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
  
 0.999
rpc10
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
   
 0.999
rpb10
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.999
RPB8
DNA-directed RNA polymerases I, II, and III subunit RPABC3.
   
 0.999
rpb6
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
  
 0.999
rpc19
DNA-directed RNA polymerases I and III subunit RPAC2.
   
 0.998
A0H81_12322
Uncharacterized protein.
   
 0.998
rpc25
DNA-directed RNA polymerase III subunit rpc8.
   
 0.998
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.