STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRO1Vacuolar protein-sorting protein BRO1. (993 aa)    
Predicted Functional Partners:
SNF7
Vacuolar-sorting protein SNF7.
    
 0.988
SPBP8B7.31
Putative magnesium-dependent phosphatase P8B7.31.
    
 0.972
A0H81_04396
Uncharacterized protein.
   
 0.941
VPS4
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
   
 0.941
A0H81_00495
DnaJ 1, mitochondrial.
 
      0.898
RIM20
pH-response regulator protein palA/RIM20.
     
0.865
A0H81_03933
Charged multivesicular body protein 5.
    
 0.833
A0H81_01475
Uncharacterized protein.
    
 
 0.819
PIM1
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family.
 
      0.786
SHO1
High osmolarity signaling protein SHO1.
   
 
 0.772
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.