STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
puf6Pumilio y domain family member 6. (662 aa)    
Predicted Functional Partners:
A0H81_05037
Ribosome production factor 2.
   
 
 0.993
nog1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.991
A0H81_04160
25S rRNA (Cytosine-C(5))-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.991
ebp2
Putative rRNA-processing protein ebp2.
   
 
 0.989
A0H81_07703
RRM domain-containing protein.
   
 
 0.988
SPBC4F6.14
Putative RNA-binding protein C4F6.14.
   
 
 0.987
A0H81_08512
Putative ribosome biogenesis protein C8F11.04.
   
 
 0.983
BRX1
Ribosome biogenesis protein BRX1.
   
 
 0.975
NOP58
Nucleolar protein 58.
   
   0.974
A0H81_05343
Uncharacterized protein.
   
   0.971
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.