STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cid13Poly(A) RNA polymerase cid13. (953 aa)    
Predicted Functional Partners:
tif451
Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family.
    
 0.725
atr
Serine/threonine-protein kinase atr; Belongs to the PI3/PI4-kinase family.
    
  0.705
PAB1_2
Polyadenylate-binding protein, cytoplasmic and nuclear.
   
 0.675
PAB1_0
Polyadenylate-binding protein, cytoplasmic and nuclear.
   
 0.675
FAL1
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
    
 0.664
A0H81_11060
Uncharacterized protein.
    
 
 0.649
A0H81_06010
Uncharacterized protein.
    
 0.646
TIF1
ATP-dependent RNA helicase eIF4A.
    
 0.633
TIF4A-3
Eukaryotic initiation factor 4A-3.
    
 0.622
RH47
DEAD-box ATP-dependent RNA helicase 47, mitochondrial.
    
 0.622
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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