STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OcrlInositol polyphosphate 5-phosphatase OCRL-1. (966 aa)    
Predicted Functional Partners:
PRPF19
Pre-mRNA-processing factor 19.
    
   0.866
A0H81_00479
Uncharacterized protein C19F5.03.
    
 0.859
its3
Phosphatidylinositol 4-phosphate 5-kinase its3.
     
 0.820
PTEN
annotation not available
   
 
 0.820
syj1
Inositol-1,4,5-trisphosphate 5-phosphatase 1.
    
0.810
lsb6
Phosphatidylinositol 4-kinase lsb6.
     
 0.798
lst-4
Sorting nexin lst-4.
    
 0.793
A0H81_14350
PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.
     
 0.791
Inpp5e
Inositol polyphosphate 5-phosphatase.
     
0.791
RPN10
26S proteasome non-ATPase regulatory subunit 4.
    
  0.790
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.