STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0H81_00436Uncharacterized protein. (547 aa)    
Predicted Functional Partners:
exo1
Exodeoxyribonuclease 1.
   
 0.777
RHM52
DNA repair and recombination protein rhm52.
    
 0.739
KU70
ATP-dependent DNA helicase II subunit 1.
    
 
 0.733
ssb1
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.725
A0H81_10723
Uncharacterized protein.
    
 0.725
A0H81_10722
Uncharacterized protein.
    
 0.725
A0H81_02253
Uncharacterized protein.
    
 0.725
ku80
ATP-dependent DNA helicase II subunit 2.
    
 
 0.723
A0H81_12811
zf-GRF domain-containing protein.
    
 0.718
top3
DNA topoisomerase 3.
    
 0.718
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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