STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
snf21Chromatin structure-remodeling complex subunit snf21. (1010 aa)    
Predicted Functional Partners:
ssr2
SWI/SNF and RSC complexes subunit ssr2.
   
 0.970
Actl6a
Actin-like protein 6A; Belongs to the actin family.
    
 0.967
A0H81_06717
Bromo domain-containing protein.
    
0.961
PBRM1
Protein polybromo-1.
   
0.959
A0H81_13302
Uncharacterized protein.
   
 0.957
A0H81_13301
Uncharacterized protein.
   
 0.957
rsc1
Chromatin structure-remodeling complex subunit rsc1.
   
0.957
A0H81_00675
Uncharacterized protein.
   
 
 0.905
A0H81_00160
QLQ domain-containing protein.
 
      0.900
rsc9
Chromatin structure-remodeling complex subunit rsc9.
    
 
 0.892
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.