STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCT1Mitochondrial intermediate peptidase. (772 aa)    
Predicted Functional Partners:
A0H81_00548
Frataxin, mitochondrial.
   
 
 0.585
frs2
Phenylalanine--tRNA ligase alpha subunit.
 
 
    0.535
mpp
Mitochondrial-processing peptidase subunit alpha.
   
  
 0.532
mppB
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family.
   
  
 0.531
dpp3-1
Dipeptidyl peptidase 3.
   
  
 0.524
ARG5,6
Protein ARG5,6, mitochondrial; In the N-terminal section; belongs to the acetylglutamate kinase family.
      
 0.518
ATP23
Mitochondrial inner membrane protease ATP23; Has a dual role in the assembly of mitochondrial ATPase. Belongs to the peptidase M76 family.
      
 0.513
FNTB
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.502
rpp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
  
 0.498
cops6
COP9 signalosome complex subunit 6.
 
 
  
 0.488
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.