A0H81_00729 protein (Grifola frondosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0H81_00729

Uncharacterized protein. (122 aa)

Predicted Functional Partners:

pmp1

0.895

SLT2_0

0.887

SLT2_1

0.887

A0H81_00731

0.887

MKP2

0.826

MAPK_0

0.826

MAPK_1

0.826

CNA1

0.765

lsg1

0.756

NMD3

0.740

Your Current Organism:

Grifola frondosa

NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0H81_00729	A0H81_00731	A0A1C7MSN6	A0A1C7MQJ2	Uncharacterized protein.	Uncharacterized protein.	0.887
A0H81_00729	CNA1	A0A1C7MSN6	A0A1C7MN38	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.765
A0H81_00729	MAPK_0	A0A1C7MSN6	A0A1C7LSD3	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.826
A0H81_00729	MAPK_1	A0A1C7MSN6	A0A1C7MRT4	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.826
A0H81_00729	MKP2	A0A1C7MSN6	A0A1C7LK48	Uncharacterized protein.	Mitogen-activated protein kinase 2; Belongs to the protein kinase superfamily.	0.826
A0H81_00729	NMD3	A0A1C7MSN6	A0A1C7LLD2	Uncharacterized protein.	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.	0.740
A0H81_00729	SLT2_0	A0A1C7MSN6	A0A1C7LZ38	Uncharacterized protein.	Mitogen-activated protein kinase SLT2/MPK1; Belongs to the protein kinase superfamily.	0.887
A0H81_00729	SLT2_1	A0A1C7MSN6	A0A1C7MA89	Uncharacterized protein.	Mitogen-activated protein kinase SLT2/MPK1.	0.887
A0H81_00729	lsg1	A0A1C7MSN6	A0A1C7MU36	Uncharacterized protein.	Large subunit GTPase 1.	0.756
A0H81_00729	pmp1	A0A1C7MSN6	A0A1C7MQH6	Uncharacterized protein.	Tyrosine-protein phosphatase pmp1.	0.895
A0H81_00731	A0H81_00729	A0A1C7MQJ2	A0A1C7MSN6	Uncharacterized protein.	Uncharacterized protein.	0.887
A0H81_00731	CNA1	A0A1C7MQJ2	A0A1C7MN38	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.765
A0H81_00731	MAPK_0	A0A1C7MQJ2	A0A1C7LSD3	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.844
A0H81_00731	MAPK_1	A0A1C7MQJ2	A0A1C7MRT4	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.844
A0H81_00731	MKP2	A0A1C7MQJ2	A0A1C7LK48	Uncharacterized protein.	Mitogen-activated protein kinase 2; Belongs to the protein kinase superfamily.	0.831
A0H81_00731	NMD3	A0A1C7MQJ2	A0A1C7LLD2	Uncharacterized protein.	60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.	0.740
A0H81_00731	SLT2_0	A0A1C7MQJ2	A0A1C7LZ38	Uncharacterized protein.	Mitogen-activated protein kinase SLT2/MPK1; Belongs to the protein kinase superfamily.	0.887
A0H81_00731	SLT2_1	A0A1C7MQJ2	A0A1C7MA89	Uncharacterized protein.	Mitogen-activated protein kinase SLT2/MPK1.	0.887
A0H81_00731	lsg1	A0A1C7MQJ2	A0A1C7MU36	Uncharacterized protein.	Large subunit GTPase 1.	0.756
A0H81_00731	pmp1	A0A1C7MQJ2	A0A1C7MQH6	Uncharacterized protein.	Tyrosine-protein phosphatase pmp1.	0.900