STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsP30S ribosomal protein S16. (92 aa)    
Predicted Functional Partners:
DAP3
28S ribosomal protein S29, mitochondrial.
   
 0.999
A0H81_12910
Uncharacterized protein.
   
 0.999
mrp-9
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
mrps5
Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
rpsO
30S ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
  
 0.999
RL25
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.999
mrp7
54S ribosomal protein L27, mitochondrial.
  
 
 0.999
rpl5b
60S ribosomal protein L5-B.
   
 
 0.999
rpl9b
60S ribosomal protein L9-B.
   
 
 0.999
MRPL33_0
39S ribosomal protein L33, mitochondrial.
  
 
 0.999
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.