STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mph1ATP-dependent DNA helicase mph1. (285 aa)    
Predicted Functional Partners:
Wrn
Werner syndrome ATP-dependent helicase.
   
 0.999
A0H81_12811
zf-GRF domain-containing protein.
   
 0.999
SGS1
ATP-dependent helicase SGS1.
   
 0.999
ERCC1
DNA excision repair protein ERCC-1.
   
 0.999
DED81
Sulfhydryl oxidase.
   
 0.999
top3
DNA topoisomerase 3.
   
 0.999
rmi1
RecQ-mediated genome instability protein 1.
    
 0.999
A0H81_04314
Thermolabile hemolysin.
   
 0.999
ssb2_0
Replication factor A protein 2.
   
 0.999
ssb2_1
Replication factor A protein 2.
   
 0.999
Your Current Organism:
Grifola frondosa
NCBI taxonomy Id: 5627
Other names: G. frondosa, maitake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.