STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNAN_0867Hypothetical protein. (321 aa)    
Predicted Functional Partners:
RNAN_0869
Hypothetical protein.
 
     0.908
RNAN_0078
Hypothetical protein.
  
     0.769
RNAN_0966
Hypothetical protein.
  
     0.768
RNAN_0134
Hypothetical protein.
  
     0.761
RNAN_1797
Hypothetical protein.
  
     0.758
RNAN_2545
Hypothetical protein.
  
     0.752
RNAN_2204
Hypothetical protein.
  
     0.736
RNAN_0127
Hypothetical protein.
  
     0.732
RNAN_0060
Hypothetical protein.
  
     0.729
RNAN_2051
Hypothetical protein.
  
     0.718
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.