STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNAN_1395Hypothetical protein. (194 aa)    
Predicted Functional Partners:
RNAN_1393
FlaR protein (FlaR); FlaR.
 
 
 0.987
RNAN_1394
Pseudaminic acid synthase.
 
 
 0.962
spsC-2
Spore coat polysaccharide biosynthesis protein spsC; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.954
neuA
N-acylneuraminate cytidylyltransferase.
 
  
 0.939
pseB
UDP-N-acetylglucosamine 4,6-dehydratase.
 
   
 0.918
RNAN_1397
Hypothetical protein.
 
     0.893
fabG-2
3-oxoacyl-[acyl-carrier-protein] reductase.
 
     0.825
RNAN_1396
Hypothetical protein.
       0.737
gltB
Glutamate synthase (NADPH/NADH) large chain.
   
 
 0.699
cysC
Probable adenylyl-sulfate kinase; Belongs to the APS kinase family.
     
 0.677
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.