STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNAN_1450Hypothetical protein. (377 aa)    
Predicted Functional Partners:
RNAN_2111
Curli production assembly/transport component CsgF.
  
 
 0.960
RNAN_2110
Curli production assembly/transport component CsgE.
  
 
 0.948
RNAN_1449
Hypothetical protein.
 
   
 0.917
fliL
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.809
RNAN_1377
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.768
RNAN_2349
Response regulator.
  
     0.738
cheW-2
Purine-binding chemotaxis protein CheW.
  
     0.729
RNAN_1353
Hypothetical protein.
  
     0.707
RNAN_1454
Hypothetical protein.
 
   
 0.696
RNAN_1447
Negative regulator of flagellin synthesis.
 
   
 0.695
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.