STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNAN_1486Hypothetical protein. (328 aa)    
Predicted Functional Partners:
RNAN_1879
Hypothetical protein.
  
  
  0.668
yaeR
Glyoxylase I family protein.
       0.663
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.663
RNAN_2701
Hypothetical protein.
 
     0.645
RNAN_0212
Formiminoglutamate hydrolase; Belongs to the arginase family.
  
     0.616
RNAN_2419
TonB-dependent receptor.
  
     0.601
RNAN_0083
Hypothetical protein.
    
  0.592
RNAN_2125
Hypothetical protein.
    
  0.592
RNAN_1049
Hypothetical protein.
  
     0.585
RNAN_2742
Hypothetical protein.
  
     0.566
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.