Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fhuCIron(3+)-hydroxamate import ATP-binding protein fhuC. (256 aa)    
Predicted Functional Partners:
RNAN_2013
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
btuF
Vitamin B12 transport system substrate-binding protein.
 
 0.994
hmuU
Hemin transport system permease protein hmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.988
btuR
cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
 
  
  0.879
hmuT
Hemin-binding periplasmic protein hmuT.
 
 
 0.771
RNAN_1151
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.485
rsmA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
    0.470
RNAN_3443
Adenosylcobinamide-phosphate synthase.
    
 0.466
RNAN_0318
Siderophore biosynthesis protein.
 
  
 0.430
lptB
Lipopolysaccharide export system ATP-binding protein.
     
  0.415
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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