Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
hinTHIT-like protein HinT. (116 aa)    
Predicted Functional Partners:
glnA
Glutamine synthetase.
   
   0.788
RNAN_2140
Hypothetical protein.
       0.513
udk
Uridine kinase.
   
  0.449
cysD
Sulfate adenylyltransferase subunit 2.
     
  0.415
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
  0.415
cysC-2
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
     
  0.415
RNAN_3211
Hypothetical protein.
     
  0.415
RNAN_1249
ATP-dependent RNA helicase, DEAD/DEAH box family; Belongs to the peptidase S24 family.
    
  0.411
RNAN_2992
UPF0434 protein; Belongs to the UPF0434 family.
  
    0.406
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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